Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015923696.1_cds_XP_016472233.1_64487
CDS Infomation

[gene=LOC107794271] [db_xref=GeneID:107794271] [protein=putative UPF0481 protein At3g02645] [protein_id=XP_016472233.1] [location=1298..2950] [gbkey=CDS]
Sequence

ATGACCTCAAATTGCAATACTACTTCAAACTTCGATGAAAATCGATGGGTTATTCAAATC
CGTCGAACACTTGACGAAGAACTTGACGAAGATACTGAAATCCCAGTTAGCATTTTCAAC
GTCCCAAAATCTCTATTATTGAGCGATCAAGATTCATACGTGCCACAAGTAGTGTCAATA
GGGCCATACCATTATTGGCGTACAGAATTGCACGATATGGAAAGGTACAAATTAGCTGCT
GCAAAAAGAACTCAGAAACAGTTACAAAGTCTCAAATTTCAGCATCTTGTGGAACAGTTG
ATAAATTTTGAGCATAGAATTCGTTGTTCGTATCATAAGTACTTGAATTTCAATGGGGAA
ACTTTGGCCTGGATGATGGCTGTAGACGCCTCTTTTTTACTCGAGTTCCTTCAAATTTAC
GCGATTAGAGAAGGTAAAATTCTAACTAAAGTTTCCTCAAGAATGTCACATTTGGTTGAT
ATTGCAGGGAGAAAATCCGCGCATAATGCCATTCTTAGAGATTTAATTATGCTTGAAAAT
CAAATCCCGTTATTTATATTAAGAAAAATGTTGGAATTCCAGTTTTCATCTTTAGAGTTG
GCTGATAACATGCTGGTATGTATGCTAACGGCGTTCTGTAAAGAGCTTTCTCCGTTCCAA
ATGGTTGACGAATTCCCAAAAATTCAAGTCACAGAATGTGCTCATTTGCTAGACTTTTTG
TACCAATTTATCGTGCCCAAATTGGATGCAACTTCTGAAATAACAGAAGATGATCACGAG
CAAACAGATGCCAACCAAGTCGAAAATAGTAATTTCGTTGGGAAATCAAGTCATATCGGA
CAACTTATTAATGAAATCTGGAAAATCCTTGTGAAAATAAACAGAGGTCCGGTACGTCTT
CTTAAAAGAATAGTATTTTCCAGGCCTGTTAAACTCATGTTTAAGCTGCCCTGGAAATTT
ATTTCTAATCTCCCTGGAATTAAACTTTTTATACTACCCATTACATATATGTTTTTTTCT
CAAGAAAAAGCTGAAGTAAATTCTGAAACTAATGTCAATAAACCCCCTCTTTTTAAAGAA
ATAGCCATCCCATCAGTAACTGAACTATCTAAAGCTGGAGTCAGTTTTGTAGCAACCAAT
GCTGGAATCATGAGCATAAATTTCGACGATAAAAAGATGAAATTTTATTTGCCTACAGTC
AGTCTAGACGTAAACACAGAGGTCATTTTGAGGAATTTAGTTGCATATGAAGCATGTAAT
GCATCAGGACCGTTGGTTTTTACGCGTTACACTGAATTAATGAACGGGATTATTGATACA
GAAGAGGATGCAATGTTACTTAGGGAAAGAGGAATAATATTGAACCGATTGAAGAGTGAT
AAAGAGGTTGCAAATTTGTGGAATGGAATGAGTAGATCGTTGAGATTAACTAAAGTGCAA
TTCTTAGATAAAGTGATTGAAGATGTGAATGGATTTTACAATGGAAGATGGAATATCAAG
ACTGGAAAAATGATGAAGCATTATGTGTTTGGGTCATGGCAAGTTCTCACATTCTTGGCT
TGTATTATGCTGTTAATGTTGATGACTTTACAAGCATTTTGTTCAGTCTATAAATGTGCT
CGTATATTTCATATTCAGAGTTCTGATGACTGA

Peptide Sequence

PEP ID

XP_016472233.1
PEP Infomation

PREDICTED: putative UPF0481 protein At3g02645 [Nicotiana tabacum]
Sequence

MTSNCNTTSNFDENRWVIQIRRTLDEELDEDTEIPVSIFNVPKSLLLSDQDSYVPQVVSI
GPYHYWRTELHDMERYKLAAAKRTQKQLQSLKFQHLVEQLINFEHRIRCSYHKYLNFNGE
TLAWMMAVDASFLLEFLQIYAIREGKILTKVSSRMSHLVDIAGRKSAHNAILRDLIMLEN
QIPLFILRKMLEFQFSSLELADNMLVCMLTAFCKELSPFQMVDEFPKIQVTECAHLLDFL
YQFIVPKLDATSEITEDDHEQTDANQVENSNFVGKSSHIGQLINEIWKILVKINRGPVRL
LKRIVFSRPVKLMFKLPWKFISNLPGIKLFILPITYMFFSQEKAEVNSETNVNKPPLFKE
IAIPSVTELSKAGVSFVATNAGIMSINFDDKKMKFYLPTVSLDVNTEVILRNLVAYEACN
ASGPLVFTRYTELMNGIIDTEEDAMLLRERGIILNRLKSDKEVANLWNGMSRSLRLTKVQ
FLDKVIEDVNGFYNGRWNIKTGKMMKHYVFGSWQVLTFLACIMLLMLMTLQAFCSVYKCA
RIFHIQSSDD

Transcript Sequence

Gene sequence data has not been registered.